Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015838065.1_cds_XP_016506890.1_20070
CDS Infomation

[gene=LOC107824603] [db_xref=GeneID:107824603] [protein=putative E3 ubiquitin-protein ligase UBR7] [protein_id=XP_016506890.1] [location=join(15144..15224,17692..17850,18441..18701,19023..19673,19774..19863)] [gbkey=CDS]
Sequence

ATGGCTGATGCATTTGAAGAGGAAGGTGATCAGACTGTTTCGATTAATGAGTATCTCGAA
GATCTCGAAGAGCAGGAGCTGGAGGCGGATCTGGTCTTAGGTGGTGATGAAGGCAAGGAG
TGCACCTATAGTAAAGGTTATATGAAGAGACAAGCTATTTTTTCTTGTTTGACATGCACA
CCAGATGGGAACGCTGGGGTTTGCACAGCTTGTAGCCTTTCTTGCCATGATGGTCATGAG
ATTTTGGAACTTTGGACGAAGAGAAACTTTAGGTGTGACTGTGGAAATTCAAAGTTCGGG
GAATTCTTCTGCAAGCTTGACGCTAGCAAAGATGTTGAAAACACGGAGAATTCATATAAT
CACAATTTCAAAGGTTCATACTGCACATGTTGCCGGCCATATCCTGATCCTGATGTTGAA
GACCAATTGGAGAATCTCCAATGCTGTATCTGTGAGGACTGGTTTCATGAGGAGCATCTT
GGTCTTGAGTCCTCTGATATGGTTCCAAGGGATGAAAATGGGGAGCCTCAATTTGAGGAT
TTAATCTGCCAGGGATGCGCAGCTATTTGTTCTTTTCTAAAGCTATATCCTCATTCTATA
TTTGCACCGGTTCAGCAGCACACTGCTACAAACTCTTCGAAGGACAAGGAGGTGGTTGAA
GATGCACCCTCGACTGTGGGATCTTCTGAGGAGCTTAACAGTGGAAGTTCCTCAATTGAG
ACTCCTGTAACTGAGGATAATCCTAAAAAAGACTTCACCGGGAAGGCTGTTGTTGGAGAA
AATGTTGCAACAAACACAATTCTGAATCAGTGTAACCAAATTGCTGGTCCTAGTACCAAA
TGTGTCCTTGGACTGAACTTGTTAGAAGCTCCAATTCGCCTTGAGAAAAGCAAGCCAATG
TTCCTTTCTAACGACTGGAGAGAAATTCTCTGTAGGTGTCCAAATTGCACAGAATTCTAC
AAACAGAAAGGGCTTGCCTTCTTACTTGAAAGAGAGGATACAATTGCAGAATATGAGAAA
ATGGCAAAGCAGAAGAGAGCTCAACATGAGCAAGAACTTAGTGCTGAGATGCTTAATAAA
CTGGGCCACGTTGGGAAAATGGAGGTTTTGACTGGCATTGCTTACCTTAAAGACGAGATC
GGTACCTACCTGGCATCCTTCGATCCATCAAAGCCAGTTACATCTGCTGACGTTCATAAG
ATTTTTGAGAATCTTGCCCAGAAGCGCAGGCGTATGACTTAA

Peptide Sequence

PEP ID

XP_016506890.1
PEP Infomation

PREDICTED: putative E3 ubiquitin-protein ligase UBR7 [Nicotiana tabacum]
Sequence

MADAFEEEGDQTVSINEYLEDLEEQELEADLVLGGDEGKECTYSKGYMKRQAIFSCLTCT
PDGNAGVCTACSLSCHDGHEILELWTKRNFRCDCGNSKFGEFFCKLDASKDVENTENSYN
HNFKGSYCTCCRPYPDPDVEDQLENLQCCICEDWFHEEHLGLESSDMVPRDENGEPQFED
LICQGCAAICSFLKLYPHSIFAPVQQHTATNSSKDKEVVEDAPSTVGSSEELNSGSSSIE
TPVTEDNPKKDFTGKAVVGENVATNTILNQCNQIAGPSTKCVLGLNLLEAPIRLEKSKPM
FLSNDWREILCRCPNCTEFYKQKGLAFLLEREDTIAEYEKMAKQKRAQHEQELSAEMLNK
LGHVGKMEVLTGIAYLKDEIGTYLASFDPSKPVTSADVHKIFENLAQKRRRMT

Transcript Sequence

Gene sequence data has not been registered.